Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824562.1_cds_XP_016501991.1_15677
CDS Infomation

[gene=LOC107820244] [db_xref=GeneID:107820244] [protein=spartin-like] [protein_id=XP_016501991.1] [location=complement(join(52984..53164,53545..53629,55104..55270,56576..57357))] [gbkey=CDS]
Sequence

ATGAACGACCTCGTAGAAAACCTCTTTCCTGAAAATGACCAAATTACCCCTAACGACCAG
CATGATACACCGTCTGCCCCTCTTGAAACCCTACTTACTATCCCCGGTTCCATGCTCCAT
TTGATCGACACACACTACTCCGTCGAACTTTCCGCCGGAGACTTATCCGTTCATCGTCTC
CGGCAAGACAACAGCGTCGTCGCTGTCCTCGTTCGTGTCGGAAACGAAATCCAGTGGCCG
TTGACTAAGGACCTTGCCGCCGTAAAACTCGACGATTCGCGCTACTTTTTCTCATTTCAA
GCTCCTAAAGACGATGAATCGGATAAGGATTCGTCAGCTAATGACTTGGCGAATGAATCG
TTGAATTATGGTTTAACGATTGCTTCCAAGGGACAGGAGAAATTACTAAAGGAGCTGGAT
GGCATTTTGGAAAATTATAGCAACTTTGCGGTGCAGAAAGTGGAGGAGACGGCCGCGGCG
GTGTTGGGCGGACCGGTGGCGAAGGAGTTGTCTCCGGCGGATTTGAAGTCGGAGAAGAAG
AAGGAAGTGTTGGAAGAGCGATGCGCGGCATATTGGACCACGTTGGCGCCTAATGTGGAG
GAGTATAATGCCTCGGCGGCAAAGTATGTGGCTTCGGGGTCAGGACACTTGATAAAGGGG
ATTTTGTGGTGTGGAGATGTGACTGCAGATAGATTGAAGTGGGGTAATGAGGTATTGAAG
AATAGGTTTAAGACAGGTTCGAAAACTGAGGTTAGTCCTGAGACATTGAAGAGGATCAAA
AGGGTTAAGAGAGTAACAAAGATGACTGAGAAAGTGGCGGTTGGAGTCCTTTCTGGAGCT
GTGAAGGTTTCAGGATTCGTTACCAGGTCAGTTGCAAATACCAAAGCAGGAAAAAAGTTC
TTTAGCCTCCTGCCTGGGGAAATGGTTCATGCTACTCTTGATGGATTTAGCAGAATATGT
GATGCTGGTGAAGTAGCTGGAAAGAATGTGATGTCTACGTCAAGCACTGTCACGACTGAA
TTTGTTTCTCACAGGTATGGAGAAGAAGCAGCTAAGGCAACCAGTGAAGGGCTTGATGCT
GCAGGGCATGCTTTTGGAACTGCCTGGGCTGTGTTTAAGATCAGACAGGCACTGAACCCC
AAGAGTGCCTTGAAGCCCACTACCTTAGCCAAATCTGCTGCTAAAGCTGATAAGAAGGCT
AAGAGTTCCAAGTAG

Peptide Sequence

PEP ID

XP_016501991.1
PEP Infomation

PREDICTED: spartin-like [Nicotiana tabacum]
Sequence

MNDLVENLFPENDQITPNDQHDTPSAPLETLLTIPGSMLHLIDTHYSVELSAGDLSVHRL
RQDNSVVAVLVRVGNEIQWPLTKDLAAVKLDDSRYFFSFQAPKDDESDKDSSANDLANES
LNYGLTIASKGQEKLLKELDGILENYSNFAVQKVEETAAAVLGGPVAKELSPADLKSEKK
KEVLEERCAAYWTTLAPNVEEYNASAAKYVASGSGHLIKGILWCGDVTADRLKWGNEVLK
NRFKTGSKTEVSPETLKRIKRVKRVTKMTEKVAVGVLSGAVKVSGFVTRSVANTKAGKKF
FSLLPGEMVHATLDGFSRICDAGEVAGKNVMSTSSTVTTEFVSHRYGEEAAKATSEGLDA
AGHAFGTAWAVFKIRQALNPKSALKPTTLAKSAAKADKKAKSSK

Transcript Sequence

Gene sequence data has not been registered.